Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941872.1_cds_XP_016485577.1_76491
CDS Infomation

[gene=LOC107805974] [db_xref=GeneID:107805974] [protein=putative pentatricopeptide repeat-containing protein At1g26500] [protein_id=XP_016485577.1] [location=4099..5625] [gbkey=CDS]
Sequence

ATGTTAAAACCTAAAATTTTCAGGTCTTTCACATTCCTCCTATCACCCCATCGTCATCTC
CAAATTATCCCCATATCAGCAGCTACCGGCGCAGCCCAATTTGCTCCTCAACTCCAATCT
CCAAACCCCATCAAACCAGTAAACGAAACCCACCTATTAAGAGTCTGTACAATTCTCTAC
CAACAACAGTACTCATCTAACCAAAAAATCCACAATAACCTCTGCAAAACACCATTTGAC
CTCACCCATGAGTTCTTCCTTCAAGTATGCAACAAATTCCCATATTCTTGGAGACCCCTT
TACAAATTCTATGAATTTACCAAGTTACAACCCCACTTCAATCACACATCCACCACCCTC
AACAAAATGCTAGATGTAATTGGAAAATCAAGAAACATTGATCTTTTCTGGGAAGTACTT
CAAGAAATTGGAAGATGTCAATTGGTCACCCCTAAAACATATGTAGTTGGGTTAAAAACT
CTGGCTGAAGCTAGGGAGTTGAAGAAATGTGTTGAAGTTTTTCATGTAATGAATGGTTTT
GGATATGGGTATAATGTGGAAATACTGAATAAGGTAGTTGAGGCTCTTTGTAGATATAAG
CTTGTTGAGGAGGCTAAGCGTGTGGTGTTGAAGTTGAAAGATTGGATAAAGCCAAATGGA
GTTACTTATAGATGGTTAATATATGGGTTTTGTGATGCTGGTGATGTGATTGAAGCCTCA
AAGATTTGGAATTTAATGGTTGATGAAGGTTTTGAACCTGATATTGAATGTGTTGAGACT
ATGATGGAGACCCTATTCAAGAATAATAGATATGATGAAGCATTGAAGGTTTTTCAATCA
ATGAGAGTGAATAGGATGTCTGAATTGGGGGTTTCTACTTACAGGTTGGTGATCAATTGG
TTGTGCAAGAAAGGGAAGCTTGGAGAGAGTTATGTAGTGTTTGAAGAAATGCAAAAGAGA
GGGATTAAAGCCGATAACCTTACATTAGCATCGATAACCTATGGGCTTATGAGTAGAGGG
AGGATTAGGGAAGCGTATAGTGTTGTGCAAGGGATGGAGAAGGCTGATATAAGTGTTTAT
CATGGGATGATCAAGGGGCTATTGAAGTTGAAAAGAGCAAGTGAAGCAACTGAAGTATTT
AGGGAGATGATAAAAAGAGGATGTGAGCCGATAATGCATACATATGTGATGTTGTTACAG
GGACATTTGGGGAAGAGAGGGAGGAAAGGATCCGATCCTCTTGTGAATTTCGATACCATT
TTCGTAGGAGGTTTGGTTAAGGCAGGAAGGACGTTTGACGCGACCAAGTATGCAGAGAGA
TTACTGTACAAAAAGGTTGAGGTGCCTAGGTTTGATTATAACAAGTTTTTGCATTATTAT
TCCAATGAGGAAGGTGTGGTTATGTTTGAGGTGATGAGCAAAAAACTTAGAGAGGTTGGG
CACTTTGATCTAGCTGATATATTTGCAAGGTATGGGGAGAAAATGGCAACTAGGGATAGG
AGGAGAAACAGAACAACAGAGTCATGA

Peptide Sequence

PEP ID

XP_016485577.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 [Nicotiana tabacum]
Sequence

MLKPKIFRSFTFLLSPHRHLQIIPISAATGAAQFAPQLQSPNPIKPVNETHLLRVCTILY
QQQYSSNQKIHNNLCKTPFDLTHEFFLQVCNKFPYSWRPLYKFYEFTKLQPHFNHTSTTL
NKMLDVIGKSRNIDLFWEVLQEIGRCQLVTPKTYVVGLKTLAEARELKKCVEVFHVMNGF
GYGYNVEILNKVVEALCRYKLVEEAKRVVLKLKDWIKPNGVTYRWLIYGFCDAGDVIEAS
KIWNLMVDEGFEPDIECVETMMETLFKNNRYDEALKVFQSMRVNRMSELGVSTYRLVINW
LCKKGKLGESYVVFEEMQKRGIKADNLTLASITYGLMSRGRIREAYSVVQGMEKADISVY
HGMIKGLLKLKRASEATEVFREMIKRGCEPIMHTYVMLLQGHLGKRGRKGSDPLVNFDTI
FVGGLVKAGRTFDATKYAERLLYKKVEVPRFDYNKFLHYYSNEEGVVMFEVMSKKLREVG
HFDLADIFARYGEKMATRDRRRNRTTES

Transcript Sequence

Gene sequence data has not been registered.